Add SpatialLeiden as clustering method #1019
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@niklasmueboe FYI as the author of spatialleiden. This PR adds |
Codecov Report❌ Patch coverage is
Additional details and impacted files@@ Coverage Diff @@
## main #1019 +/- ##
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- Coverage 66.63% 66.19% -0.45%
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Files 40 40
Lines 6060 6093 +33
Branches 1015 1031 +16
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- Hits 4038 4033 -5
- Misses 1662 1698 +36
- Partials 360 362 +2
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Close #879
Added support for
spatialleidenas a flavor insq.gr.calculate_niche, following up on the idea mentioned in #879. The method is now integrated via theflavor="spatialleiden"option, wrapping thespatialleiden.spatialleiden()function.